[8th Dec, 2022] Several bugs fixed. [14th Aug, 2020] Harukei-3 genome paper has been published in Communications Biology (DOI: 10.1038/s42003-020-01172-0). |
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 Introduction
JBrowse genome viewer
   
 [3rd Apr, 2020] Harukei-3 genome reference ver1.41 is available. Tasuke+, multi-genome viewer      # Tasuke+ is a multi-genome viewer designed to visualize resequencing data.  [30th Oct, 2022] As a trial, published dataset of 320 melon accessions has been made available.  [LINK] Gene expression map viewer (RNA-seq atlas)      # This app is designed to visually analyze tissue-specific expression pattern of melon genes.  [3rd Apr, 2020] RNA-seq of 45 tissues is available based on Harukei-3 ver1.41.  [LINK] Co-expression viewer      # This app is designed to analyze co-expression relationship between genes.  [3rd Apr, 2020] Co-expression DB was constructed based on tissue-wide RNA-seq and field-omics leaf RNA-seq datasets.  [LINK] GO analysis tool      # This app performs term enrichment analysis based on both GO and InterPro ID.  [3rd Apr, 2020] Updated datasets (Harukei-3 ver1.41).  [LINK] e-TILLING      # This app performs in silico screening of specific accessions or mutants which carry DNA variants (e.g. a.a substituting variants) within a gene of interest.  [30th Oct, 2022] As a trial, published dataset of 320 melon accessions has been made available.  [LINK] BLAST+      [3rd Apr, 2020] Updated datasets (Harukei-3 ver1.41).  [LINK] short DNA mapper      [3rd Apr, 2020] Updated datasets (Harukei-3 ver1.41).  [LINK] Gene ID search      [3rd Apr, 2020] Updated datasets (Harukei-3 ver1.41). |