Melonet DB
  
for functional genomics research of muskmelon
  
gene information  : 
  
[Last update: 28th, Oct, 2023]
TOP
JBrowse
Harukei-3 ver1.41
TASUKE+
320 lines from public DB
Expression atlas
Co-expression
GO analysis
Sequence analysis
Blast+
Short DNA mapper
Clustalw (fasta input)
Primer finder
Tm calculation
Download
 [TIPS]
Simultaneous mode that searches of multiple genomes at once has been made available.
Short DNA mapper
    
mapping short DNA sequence to the genome
query (input):
! ! ----------------------------------- Disclaimer ----------------------------------- ! To use this app, please activate cookie on your browser. ! We will not provide any access information to the third party without any notice. ! ! Error : disabled cookie ! ---------------------------------------------------------------------------------- !
sequence database:
Simultaneous search of 2 reference [ Harukei-3 v1.41, DHL92 CM3.6.1 ]
Melon, Cucumis melo [Harukei-3 genome reference, ver1.41]
Melon, Cucumis melo [DHL92 genome reference, CM3.6.1]
Melon, Cucumis melo [DHL92 genome reference, CM3.5.1]
Tomato, Solanum lycopersicum [Heinz1706 genome reference, SL4.0]
Arabidopsis thaliana [Col-0, TAIR10 genome reference]
report option:
report all hits with SNP/Indel
report TOP 10 hit with SNP/Indel
report all hits without SNP/Indel
report TOP 10 hit without SNP/Indel
flanking seq (bp):
0
50
500
1000
3000
5000
[! Result will be shown below]