Melonet DB
  
for functional genomics research of muskmelon
  
gene ID search  : 
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[Last update: 28th, Oct, 2023]
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Harukei-3 ver1.41
TASUKE+
320 lines from public DB
Expression atlas
Co-expression
GO analysis
Sequence analysis
Blast+
Short DNA mapper
Clustalw (fasta input)
Primer finder
Tm calculation
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Short DNA mapper
    
aligning short DNA sequence to the genome
query (input):
! Enter DNA sequence like below (n < 5, seq length: 15 bp <= * <= 500 bp). For trial, just click "Search" button. AGTACTTATGAACGTTATTGGGCTATTACGCATGTTT GCAAGTCATCTCCGTCCATATTTGATCAAAATTAAAGCTCCTCCTGAGAAAG ATGACCAGAAGTGACCGTGGCGAGCCATAGGGACCCGTTTGCTTCCGCTTACGTCATGTGT
sequence database:
Simultaneous search of 2 reference [ Harukei-3 v1.41, DHL92 CM3.6.1 ]
Melon, Cucumis melo [Harukei-3 genome reference, ver1.41]
Melon, Cucumis melo [DHL92 genome reference, CM3.6.1]
Melon, Cucumis melo [DHL92 genome reference, CM3.5.1]
Tomato, Solanum lycopersicum [Heinz1706 genome reference, SL4.0]
Arabidopsis thaliana [Col-0, TAIR10 genome reference]
report option:
report all hits with SNP/Indel
report TOP 10 hit with SNP/Indel
report all hits without SNP/Indel
report TOP 10 hit without SNP/Indel
flanking seq (bp):
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